rs31650207 SNP Detail

Summary

• ID
  rs31650207
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105437651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGGCTGGTG GTAGTCTGAG AGTGTATTTC CCTAGATAAG
  TAAAATGAAA AACTGGGTAA GAAGATGACA AAGGTCTTGA GGGACCAATT TGGGAGGAAG
  K
  CTTTGTATGT GTGTGTAAAG TCAGTTAAGT GGATGACAGT AAGCAACCTG GAAGCTTTTA
  TACCTTGTCC TTAGGACTGT GATCGATGTG AGGGAAGAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46054210	mCV23589939	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss145608990	ENSMUSSNP7245367	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss322370581	CHEV_7_112936958	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31650207					SNP	T	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105437651 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19545	CpG island 19545	372 bp distal
Dchs1	dachsous cadherin related 1	790 bp upstream
Rr652815	regulatory region 652815	801 bp distal
Rr652816	regulatory region 652816	300 bp distal
Tssr74105	transcription start site region 74105	950 bp upstream
Tssr74106	transcription start site region 74106	921 bp upstream
Tssr74107	transcription start site region 74107	889 bp upstream
Tssr74108	transcription start site region 74108	805 bp upstream