rs31657419 SNP Detail

Summary

• ID
  rs31657419
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:77493141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTTATCA CAAATTAACA
  AAATACATAA TAGCAAGGAT CTTACATGAG ACAGATGTGT TTCCACTTAT TTAAGTAATT
  AAAAAGTAGT ATAGAAAGTT TTTAATGCTG AGAAAACTGA GGTTTTTCAC TAAATTATTT
  CTGATTTCTG TACAGTGATA GCCTACAAAT TCATAAGAAA AATACAATAG TTTTACTTAA
  Y
  TAAAAGAATA TAATTATTAA GAGTTTATTC AGTGTTTTTA CCATCTAATC ATATTAATAT
  ATAAGAAAAA CAAGCTGTTG GGTTTAAAAA TAGCTTTATT TAGCATACCA AAAACACAGA
  AACATAAGAA AATTGTATCT AGTATAAACA TAAAAAGTTA AATATAATTT AATGTAAACC
  AAGCATTTGA AAATGTGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	NZW/LacJ
ss49761185	NES12392115	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	NZW/LacJ
rs31657419					SNP	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49761185	NES12392115	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:77493141 () rs orientation: forward

Symbol	Name	Function Class
Prrg1	proline rich Gla (G-carboxyglutamic acid) 1	78 bp downstream