rs31657514 SNP Detail

Summary

• ID
  rs31657514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80077792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGGAACA TAAGCCTTAG
  GTAGGGTCAG TCGGCCATGG GGAGAGGCAG GGCTTACCCT TTGATAAGCC TTACCCCCTT
  ACTTGTAAGT AGCAGTGAGT GGCTGCCGGC AGGATGCATA CAGCATGAAG AGCTCTGAGT
  AGACTTCTGT GGGTATCTCT GGGTGGACTC AGGATAGGCC CCCATACCTC CCACAGTTGC
  R
  GGTCACTGAG AACTAGGGAA CAGATTTGAG CCAGGCAGGC AAACAGGTAA CAGCTGAGTA
  GCCAGAGCAC TAACCTTGGA GCCCTCCGCC CCTGGCCTGA GTTCCCAGTG GTCAGGGCTG
  GGGTAAAACA CAGGGGGAGG GTGGAGATGT GAACCAGGAG GTTGCTATGG AGAGACATGG
  ACCAGGCACG TTAGGAACCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39312192	mCV23256726	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148214343	ENSMUSSNP2421754	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31657514					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80077792 () rs orientation: forward

Symbol	Name	Function Class
Gm63613	predicted gene, 63613	within coordinates
Mgat3	mannoside acetylglucosaminyltransferase 3	within coordinates
Rr505908	regulatory region 505908	1446 bp distal
Rr505909	regulatory region 505909	579 bp distal
Rr505910	regulatory region 505910	34 bp distal
Tssr4660	transcription start site region 4660	459 bp downstream
Tssr132185	transcription start site region 132185	1713 bp downstream
Tssr132186	transcription start site region 132186	1409 bp downstream
Tssr132187	transcription start site region 132187	577 bp downstream
Tssr132188	transcription start site region 132188	521 bp downstream
Tssr132189	transcription start site region 132189	506 bp downstream