rs31657848 SNP Detail

Summary

• ID
  rs31657848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25955751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATTAATA CTCATGTCAG
  TCACCATGTT ACACACCGTT AACAAGTGTA TGTGTGAAAG ATGTATATAT ATATATATTA
  TATATATATT ATATATATAT AATTATTGTA TACCTATAGA CAGAGTTAGA AGAGAGTGAT
  ATTAGAGAAT CAGAGAGAAT GAATGATGCA GTGAGAGAGG TCATCTAATA CAGTTGATTT
  Y
  AATTTTCCTA AAGCCACTCC CATTTAATAT AGTTCATCAT GTTGAGATGA CCCCAACCAT
  AAAATTATTT TTGTTACTAC TTCATAGATA TAATGTCAAT ACTGTTATGA AACACAGGCC
  AAATATCTGA TATGCATGGT ATCTAATATG TGAGTCCTTC TGCACAGATT GAGAACCACT
  GATCTGCTGT ATCTCATCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46054665	mCV24588431	ABI	CRAMUS_MOUSE	f	SNP	C		T	T
ss148607764	ENSMUSSNP2255048	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31657848					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25955751 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	700 bp downstream