rs31658697 SNP Detail

Summary

• ID
  rs31658697
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30737938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTGGGGG ATTCTAGGCA
  GGGGCTCTAC CACTGAGCCA CACCCCAGCC CCTCACTGGA GGATTCTAGG CAGGGGCGCT
  ACCACTGAGC CACGCCCCCA GCCCCTCACT GGAGGATTCT AGGCAGGGGC TGTACCACTG
  AGCCACGCCC CCAGCCCCTC ACTGGAGGAT TCTAGGCAGG GGCTGTACCA CTGAGCCACG
  M
  CCCCAGCCCC TCACTGGAGG ATTCTAGGTA GGGGCTCTAC CACTGAGCCA TGCCTTCAGC
  ATCACTAATC ATTAACTGAA GAAATTACAA GAAGTACTCT AAATTATATT ATACTCCAAG
  AAAAAGTATA ATTATTATTT AGAAAAAAAA AATCTAAAGA GATCCAGACC TGAACAGAAG
  CTATGGCTGA GCACTCACCG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46055166	mCV22838003	ABI	CRAMUS_MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs31658697					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30737938 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	within coordinates
Gm38984	predicted gene, 38984	within coordinates
Gm71772	predicted gene, 71772	1200 bp downstream
Mir7050	microRNA 7050	1745 bp downstream
Rr368303	regulatory region 368303	1957 bp upstream
Tssr65831	transcription start site region 65831	1505 bp downstream
Tssr65832	transcription start site region 65832	1096 bp downstream
Tssr65833	transcription start site region 65833	657 bp downstream
Tssr65834	transcription start site region 65834	626 bp downstream
Tssr71892	transcription start site region 71892	1419 bp upstream
Tssr71893	transcription start site region 71893	646 bp upstream
Tssr71894	transcription start site region 71894	623 bp upstream
Tssr71895	transcription start site region 71895	594 bp upstream
Tssr71896	transcription start site region 71896	564 bp upstream
Tssr71897	transcription start site region 71897	546 bp downstream
Tssr71898	transcription start site region 71898	1695 bp downstream