rs31659457 SNP Detail

Summary

• ID
  rs31659457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:127575452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTCTTGC TTGGGAGCTG
  TTCTTTTAAA GTTGATGGTG TTTTAAAGTC CAAAAATTAC TAAACCAGAC AATTTTTTAC
  TTATTTTTTT GGATTTTTGA GATGGATTTC TCTGTATGAC TCAGAAATCC ACCTGCCTCT
  GCCTCCCAAG TGCTGGGATT AAAGGCGTGC GCCACCACAC CCGGACAGAC ATGATGTTTC
  R
  TACCTTTATT CCTAACAGGA TGATCTCTTG AGTTCATGTC TAGGCCATCC TGCTCTACAG
  AGCTAGTTCC ACGACAGCCT GGGCTATACA GAGAAACTAA ACTCAGTTTT AAAAACCAAA
  ACAAAGAAAT GCACACATGT AAACTGTTGA GTAACATTAG GTGGATAAAA AGACCAGACT
  GAAAGATGTG TTAAGGGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss46054584	mCV23385149	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss145883417	ENSMUSSNP3637678	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs31659457					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127575452 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fus	fused in sarcoma			Intron
				Noncoding-Transcript-Variant
Tssr69330	transcription start site region 69330			1873 bp downstream