rs31660246 SNP Detail

Summary

• ID
  rs31660246
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:77726161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGCAGACA TGGAAGGACC ATGGCTCCAG CTGCATATGT
  AGCAGAGGAT GGCCTTGTTG GGCACCAATG GGAGGGTAGG CCCTTGATTC TGTGAAGGCT
  Y
  GATCCCCCAG TGTAGAGGAA TGCTAGGGCT AGGAGGCAGG AGTGGGTGGG TGGGTGCGTG
  GTGCAGTACC CTCATAGAAG CAGGGGGAGA GGGAATGGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46055080	mCV23909339	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145115637	ENSMUSSNP5732757	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322274896	CHEV_7_85221299	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31660246					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:77726161 () rs orientation: forward

Symbol	Name	Function Class
Gm53379	predicted gene, 53379	within coordinates
Tssr67298	transcription start site region 67298	1204 bp upstream