rs31662481 SNP Detail

Summary

• ID
  rs31662481
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12570252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG TTTGAAGATG TATCTCTGAC
  R
  TTTACCGAGG AAGAGTGGGC ACAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46055703	mCV23046828	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss322106507	CHEV_7_13421674	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31662481					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12570252 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	906 bp distal
Rr642383	regulatory region 642383	1554 bp distal
Rr642384	regulatory region 642384	1379 bp distal
Rr642385	regulatory region 642385	832 bp distal
Rr642386	regulatory region 642386	478 bp distal
Tssr64479	transcription start site region 64479	1514 bp downstream
Tssr64480	transcription start site region 64480	1273 bp downstream
Tssr64481	transcription start site region 64481	1064 bp downstream
Tssr64482	transcription start site region 64482	371 bp downstream
Zfp110	zinc finger protein 110	within coordinates