rs31663160 SNP Detail

Summary

• ID
  rs31663160
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:6675014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTCCTCAG TTTCTGTTGT TATATCTCCA ACTTCATTTC
  TGATTTAATT AATTTCTATA CTGTCTCTGT GCCCTCTAAT TAGACTGGCT AGGGGTTTAT
  Y
  TATCATGTTG CAAATACATT TCAAAATAAA ATAGTACAAG CAGAATTATC TAGTGTGGAT
  AGACAATATC ACTCCTGAAA AACATATGTT TTTTTTTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45557213	mCV23623636	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss134550107	ENSMUSSNP4579591	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320639632	CHEV_3_6609954	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs31663160					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:6675014 () rs orientation: forward

Symbol	Name	Function Class
Gm38291	predicted gene, 38291	1251 bp downstream
Rr374438	regulatory region 374438	1017 bp downstream