rs31663221 SNP Detail

Summary

• ID
  rs31663221
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:75014010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGAGCAT GAGGGAATGC
  CTACCTTGTC ATGTAGATGA ATTATCACCC TTCTGGGGTT CAGACCTCAG CTCAACTGGA
  GACTAGTCTG TCTGTGCATA GCCTAATGCC CCACATCCAA TAAAAAATAA AAAACTAAAA
  ACTAAAAACT AAAAAATAGC AGCAAATGCT TTTAACTGCA GAACCATCTC TCCAGATAGC
  R
  CCCCCAACAT TATATTTAAA AAACATATTT TGTAGAACAA ATTTTCATCC TGGTAAAATT
  TCTGCTATCA ATTTAAAAGT TTAAAACAAA CTTTGGAATA GTCAGACATT TTATTCCATA
  CCTATTCCTC ATGGGCTCAT ATTTTTATTC TCCTCAACCC AGAATATTTT ATTCAAATGT
  AATATATTTC CACTTTTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49762008	NES12393343	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31663221					SNP	A	A	A	A	A	A	G	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49762008	NES12393343	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:75014010 () rs orientation: forward

Symbol	Name	Function Class
Gm7155	predicted gene 7155	1049 bp downstream