rs31663222 SNP Detail

Summary

• ID
  rs31663222
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:75013108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATAACAT TTGAAATGTA
  AATGAAGAAA ATATCTAATA AAAAAGAGGA TTAGATAGAG AACACAAAGT AAGGATAACC
  CTCTTCCAGT TCTAAAGAGA AGAAAAAGTA GATCCATTTA AATGTTCTTT GGAATGACTC
  AAAGCTCAGA TGTTTTCTTA CCTTAATTTC ACATCAATTA AACTAATAGC CTCTTTGATG
  W
  CTATAGAAGT ATGCTTTCTA CTTTGCAGTA TTTACTAATC AGAAAGCAAG CAAATAGACT
  TAATTATATT GTCAAACACA AAAGAGAAAC TTTACTACTC TGCCAAATCC ATATTTCAAA
  AAATGATTTT TGTTGCTTTG TTCTATCCAA ACCTGAATTG TCCTTTAGAC AGCTGAAGTA
  ATTTACTAAT AAATATATTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49762009	NES12393355	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31663222					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49762009	NES12393355	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:75013108 () rs orientation: forward

Symbol	Name	Function Class
Gm7155	predicted gene 7155	1951 bp downstream