rs31664060 SNP Detail

Summary

• ID
  rs31664060
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:5300369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA TGTCACCTCC CTAGGGCAGT
  R
  AGATCCTTGG AAACAGTGGA AGTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45057614	mCV24046462	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss148482016	ENSMUSSNP4253394	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss319613585	CHEV_1_5220227	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31664060					SNP	G	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:5300369 () rs orientation: forward

Symbol	Name	Function Class
Rr22269	regulatory region 22269	1232 bp proximal
Rr370760	regulatory region 370760	1658 bp downstream