rs31665808 SNP Detail

Summary

• ID
  rs31665808
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170418765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAA CCAAGTGGAA CTTTGGTGGT
  R
  TCCGTACTTT GGTCTGCAGT GAGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45057230	mCV24430357	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss146138599	ENSMUSSNP3621603	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320111486	CHEV_1_172521327	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31665808					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170418765 () rs orientation: forward

Symbol	Name	Function Class
Cpgi994	CpG island 994	923 bp distal
Nos1ap	nitric oxide synthase 1 (neuronal) adaptor protein	1394 bp upstream
Rr423086	regulatory region 423086	1346 bp distal
Rr423087	regulatory region 423087	845 bp distal
Tssr14920	transcription start site region 14920	1427 bp upstream
Tssr14921	transcription start site region 14921	1342 bp upstream