rs3166765 SNP Detail

Summary

• ID
  rs3166765
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:89267724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTCTGCT TTTGTTTTTT
  TTTTTAAGAT TTGTTTATTG TTATTTCTAA GTACACTGTA GCTGTCTTCA AACACCCCAG
  AAGAGAGCAT CAGATCTTAT TACAGATAGT TGTGAGCCAC CATGTGGTTG CTGGGATTTG
  AACTAAGGGT CTTCAAAAGA GCAGTCAGTG CTCTTAACCC CTGAGCCATC TCTCCAGCCC
  Y
  CCCTCCCCCC CGGGGTAAAT AAATTAAGAC TTACTCCCGA TGTGGATTCC GGGATGTGTG
  GGTAGAGAAG GTCCCTCCTT TAAACAAACA AAACAAGTAC TTATGCCTAG TGGAGTGTCC
  ACGTTCCAGC CTGAGAGAAG AGAACTGGGT GAGGATGGAG TGTGGTTTGA CTCAGATAGG
  AAAGGCAGGG GATTGCAGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39329094	mCV24980873	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs3166765					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:89267724 () rs orientation: forward

Symbol	Name	Function Class
Gm62017	predicted gene, 62017	within coordinates
Klhdc7b	kelch domain containing 7B	1396 bp upstream
Tssr4689	transcription start site region 4689	1339 bp upstream
Tssr132668	transcription start site region 132668	1354 bp upstream
Tssr132669	transcription start site region 132669	1367 bp upstream
Tssr132670	transcription start site region 132670	1381 bp upstream