rs31668327 SNP Detail

Summary

• ID
  rs31668327
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100973593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACA GGATGATAAT GGCAAGGGGG
  R
  GGATGAAGGT CTGTGGAGAA GGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39313200	mCV23103731	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31668327					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100973593 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7765	CpG island 7765	1754 bp proximal
Fignl2	fidgetin-like 2	within coordinates
Gm53912	predicted gene, 53912	676 bp upstream
Rr509897	regulatory region 509897	within coordinates
Rr509898	regulatory region 509898	1676 bp proximal