rs31669167 SNP Detail

Summary

• ID
  rs31669167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127794959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTAGT CTCTGTGAGT
  TCCTATGAGC TTTCCTCGTG TTGATTTACA GGGTCTTGTT TGCTTGGTGT CCTCCATCCC
  CTCTGGTGCT TACATTCTTT CTGCTTCCTC TTCTGATGAC TCTAGAGGGG GAGAGTTTTG
  ATGGAGATCT CTCGTTTAGG GCTGAGTGTT CTGAGATCTT TCATTCTCCA TAATGTCTGG
  Y
  TGTGGGTGTA TGTATTTGTG CCTATCTGAT GCAGGGGGAA ACTTCTCTGA TGTTGACTGG
  GCAACACATT AATGTACACG TACAGCAAAA TGTCACCAGG AGTCATTTCA TTGCTATATT
  TTGTTGTAGT TGTGGTTCCA CAGAGCAGTA GTATTTGGTT TTGCCTCAGG TCCCTGGATC
  ATCTAGTCTT AGGTTCTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45557974	mCV25234260	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss135877547	ENSMUSSNP6031668	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss320959099	CHEV_3_127704228	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31669167					SNP	C	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127794959 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	664 bp proximal
Rr584917	regulatory region 584917	751 bp proximal