rs31672929 SNP Detail

Summary

• ID
  rs31672929
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144415734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG TCTCTCGGTG CGGAATTCCA
  K
  CGCCTTCACC CGCCCGCACC CACGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
ss46057391	mCV24316494	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss145992486	ENSMUSSNP314195	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
rs31672929					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144415734 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20003	CpG island 20003	within coordinates
Cpgi20004	CpG island 20004	644 bp proximal
Fgf4	fibroblast growth factor 4	within coordinates
Rr366757	regulatory region 366757	608 bp downstream
Rr366758	regulatory region 366758	1463 bp upstream
Tssr70358	transcription start site region 70358	602 bp downstream