rs31674372 SNP Detail

Summary

• ID
  rs31674372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99666158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAATTAG AGGCCAGGCT
  GAGTGGCACA GCGAGCTGAG GTCAGGCTGG ACTGAGGAGA TATATTTTAT TTATGGTCAG
  ATAGTTTTTC AAGTAATCTC TATTAGAAGA GGCTGCAGTT CTCTAGGGAA TATGGGAAGG
  AAAAAAAGAA AAACAACACT GTGGTTCATG AGAAGGAAAA GGAAGTACAC TCTATTCTGG
  R
  GGAGACCCTA AGAGAACACA AACAAGCTGG GCCTACCTAT GATCCTAGCA CTTGGGAGGC
  TAACGCAAGG GGAATTTGAG TTGTGAGCTA GCCCCGACTA CATGGCAAGA CCTTGTCTGG
  AGAGGAAGCT TTTTATCAAG TAGGATAGGT TTAAGACTCC TTAAAACACA AAGCATAGCT
  AGCTCTTAAC CCCAGGACTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39313494	mCV23428484	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148470468	ENSMUSSNP2218046	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss325081773	CHEV_15_99598708	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31674372					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99666158 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	within coordinates