rs31676113 SNP Detail

Summary

• ID
  rs31676113
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102058807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA ATAAGATATT ATTAACATTA
  S
  AGGTTTTTGT GGTCCCATTT TTAGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	PWD/PhJ	SM/J	WSB/EiJ
ss45558867	mCV23804466	ABI	CRAMUS_MOUSE	f	SNP		G	G			C		C
ss51587489	NES14668416	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	C		G	C	G		G		G		G
ss135554442	ENSMUSSNP6835975	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G					C				G
ss320854657	CHEV_3_101955414	CHEVERUD	SCREENING_POP	f	SNP										G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	PWD/PhJ	SM/J	WSB/EiJ
rs31676113					SNP	G	G	G	G	C	C	G	C	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51587489	NES14668416	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102058807 () rs orientation: forward

Symbol	Name	Function Class
Gm65665	predicted gene, 65665	within coordinates
Rr582191	regulatory region 582191	1185 bp distal
Rr582192	regulatory region 582192	708 bp proximal