rs31676264 SNP Detail

Summary

• ID
  rs31676264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:86737773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAAAATCA AACCAACAAT
  AAACCAGTAA TGCAAAAATA GCTTTATATT TATTCTTAAA GACTATCTCA AGTTCTACAA
  ATGGCCAGGC CGTCTCATCC CATTTATTTT CCTTCTTCCT AATATTTATG TAAAAATAGG
  TCATTTTGAG ATGTGAAGAA CTTTCCCAGA TAGAAGAGTG GAAAGCTGTC TCTAAAATAC
  R
  TATAAATAAA TATTCCCTTT TTCCTCTTCA TCACCATGTC ACCTGGGGCC TTTTCTGAAA
  GCTGTGGCTT TCTTGCTCTG TACTATCTGC CCTAGGGCAA GACATTTTTT ATAATAAATT
  TAGTGAATCC ACCAGCTCAC CTCATACTGT CTTCATGAAC AGTTTTGGAT AGCATAACTG
  TGTTAAAAAA AAAAAACAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss46593358	NES10431628	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs31676264					SNP	A	A	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46593358	NES10431628	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:86737773 () rs orientation: forward

Symbol	Name	Function Class
Tmprss11f	transmembrane protease, serine 11f	within coordinates
Tssr51538	transcription start site region 51538	1519 bp downstream