rs31676353 SNP Detail

Summary

• ID
  rs31676353
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37181642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGAGCTGT GGGAATTGAG
  GTTTTCCCCA GACTGCCTCA ACACAACTGC ACTAAACACA GCTCTGATGA GAAAGAGAAT
  ATTTCTATTC CATAGAAACC CTGGTATAAC CTAGACAGTG GCATGCTAGA ACACCGGGAA
  GACTTTAGAA CAGCACCTCC TTCTGGATTC CCCAGAGCCT CTCTGTAATC TTCTTCAGGT
  R
  GGCTTCCTCT TCAGGAATCA GAATCAGCTT CACAAATTCC ATTTTGTCCC AGGACACAAG
  GGACACTGAG GGAGACATCA TCATTGATTC CACAGTGAGA GGATTGAGCT ATGCTGTCTC
  CATGACAGGC TGCAAAATGC CAGTTCAGAA GACTAGTTTA AGTTTCTGTT TCTAGGAGCT
  GAGCAAACCA GTTCCAGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39313516	mCV22711114	ABI	CRAMUS_MOUSE	f	SNP		G	A
ss51641614	NES14589894	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A	A	A	A	A	G	A	A	A	A
ss147625495	ENSMUSSNP5053938	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31676353					SNP	G	G	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51641614	NES14589894	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37181642 () rs orientation: forward

Symbol	Name	Function Class
Gm8664	predicted gene 8664	within coordinates