rs31676791 SNP Detail

Summary

• ID
  rs31676791
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:82046472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGCAGCT GTATACGGAC
  AATTTTACAG TTGTGTGCTG TGTGCCTGGC CTGACAGATG TTGCACAGGT GTCTGACAAC
  CCTCAGAACC TGCCTCTTGC AGGCTTTTAC TGCTGTGTGA CATGTAATAG GGTGGCAGTC
  AGTGTTTATT CCATGCGTGT CTTTATTGCC GTGTTCTCTA TTAGAGCAGA AGGGGCTAAG
  R
  AGAGTTGTCT TTGGACGGAG ATCTGTTATA GAATAAGAAT TTGGATAGGA AAGTATGCCT
  ATGAACTACA AAGAGCTAGT CTCTCTTCCC TGTGTCCCTT GATGAGTTAG TTACGTGCTT
  ACTGTTCAGT TAGCTTTGGG GAGGGGTTGG TGGTTGCTTT TATGGTGGTG AAGACAGAAC
  CTTAGAGCTT ACTGAGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48076878	NES12079050	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31676791					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076878	NES12079050	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82046472 () rs orientation: forward

Symbol	Name	Function Class
Rr404532	regulatory region 404532	1555 bp upstream
Rr506421	regulatory region 506421	602 bp distal
Rr506422	regulatory region 506422	within coordinates
Rr506423	regulatory region 506423	1437 bp proximal
Rr506424	regulatory region 506424	1909 bp proximal
Srebf2	sterol regulatory element binding factor 2	Intron