rs31680377 SNP Detail

Summary

• ID
  rs31680377
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:67878164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTCTCC TTGCTTTGGT
  TCACACACAC ACACACACAC ACACACACAC ACACACACAC ACACCCCAAT TTGGGAATAC
  AATAGCAGTT TTAACTGCAG ACAATAGTCA TTGGATTATT ATTTAAATGA ATATTTGATC
  TTTCACACAC ACACACACAC ACACAATAGC TGCTGAGTCC CCAGGATGCA GCAGAGCTGG
  Y
  CCAGTGGCCC ATCTGCCACC TCCTTCACAA GCAGGCCCAC CTGTCTTTAG AACCAGCTTG
  TCTGAAGGGG TGGCCTCCCT GGGAGCAAGA TGTAAGACAC CAACTCCCCA TGGCCAGGAG
  CAGCAACTTT AGTGGGTGTG CTATAAAGCC CACTCCCGGG CCGGAAATCC CAAAGTGGAG
  TAGAGCTGAC CCTACAGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46057575	mCV25449877	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss144994986	ENSMUSSNP3056905	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31680377					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:67878164 () rs orientation: forward

Symbol	Name	Function Class
Igf1r	insulin-like growth factor I receptor	within coordinates
Rr648449	regulatory region 648449	5 bp proximal
Tssr67118	transcription start site region 67118	1825 bp downstream
Tssr67119	transcription start site region 67119	1761 bp downstream
Tssr67120	transcription start site region 67120	294 bp downstream
Tssr67121	transcription start site region 67121	1879 bp upstream