rs31681503 SNP Detail

Summary

• ID
  rs31681503
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107376882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGAGAGTGG AGTCTCTGCT AGGGCCTGGC TTTCCTGTTT TCTAATTCTG CTCAGGACTA
  GGCACGGGGC CAGCTAGGGG GTGTTGTCAG GTGAGGGGGC CGATGGTGGG ACCCCAAAGC
  TCATTTCCCT CTCACCTTAA ATACTATGAC AGGTGGGACC AAGAAGGCTA GAAGTGAGAG
  AAGGTGTGTG GAACTGAGGA ATAAGAGATG GCAGGCTGAG GGTGGGGGAC CTCTCAGGCT
  AGGGAGGGAG GTATCCAGGA GGCTTTAGGA GCAAGTGGTG GACATCTGGG CCTAGGCTGT
  M
  GTCCCTCTCA GGACTGAGGG AAATTTAGGC CACAACAATG ACCCAGGAAC CTCTGTCAGG
  TGCCCAGGTC TGTTCCTGCT GACCAGAACT TTCAAAGATA GAAACAGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGCAT GGATGTTGTA TGTAAGACCA
  CCACCCCTGG CTCCAGGTTG GAAGGAGAAG ATTGAGAAAT GACTAAACCC TAGCTAAGGT
  GACCCCATCC ATGCACCCAT CCATCTGTCC ATCCCAACCG GCCAACCATA TAAGTCCATA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45559121	mCV24920042	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31681503					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107376882 () rs orientation: forward

Symbol	Name	Function Class
D3Mit103	DNA segment, Chr 3, Massachusetts Institute of Technology 103	54 bp proximal
Slc6a17	solute carrier family 6 (neurotransmitter transporter), member 17	within coordinates