rs31686127 SNP Detail

Summary

• ID
  rs31686127
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135109623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCT TAGCTTCGGG GAGCAACTCC
  Y
  GAGATGCACA CAGATTTTAA CAAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45059323	mCV25393537	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss145526787	ENSMUSSNP5298571	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss319988334	CHEV_1_137078462	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31686127					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135109623 () rs orientation: forward

Symbol	Name	Function Class
Gm70875	predicted gene, 70875	806 bp downstream
Rr419094	regulatory region 419094	1954 bp distal
Rr419095	regulatory region 419095	within coordinates
Rr419096	regulatory region 419096	1618 bp proximal
Tssr13831	transcription start site region 13831	991 bp upstream