rs31686867 SNP Detail

Summary

• ID
  rs31686867
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185153634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGTAGCC CATGTTATAT
  TCATTCTGTT GCCTTATAGT ACTCTATGCC TAATACATAG TGGGTTTAGT GGGTTTATTT
  ATTGAGACAG GGTCTCACTA TGTAGACCAG GCTAACCTCA AATTCAGAGA GATCCACCTG
  TTGTCTTCAC TGTCTGAGTG CTGGGATTAA AGGCATGCAC CACCATTCCT GGCCACATTG
  M
  GTCTCAATAA ATCTGACTGG GAGAGAGTAG ACTAATTTTA GCCTTACCTT TGGTGCTTGA
  TTGGGTGTTT CTAGGCAGCT AGTTTATAGC TTTCTCTGGA TTTATTCATA AAAGTATCTT
  TTTTTGTTTG GTTGGTTTTT GTTTTTTTGA GACAGGGTTT CTCTGTGTAG CCCTGGCTGT
  CCTGGAACTC ACTCTATAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45058845	mCV24553219	ABI	CRAMUS_MOUSE	f	SNP		A	C					C	C
ss46731574	NES10640067	PERLEGEN	MM_PANEL2	f	SNP	A		C	A	C	A	C		C	C	A		A	C	A	C		C
ss146431936	ENSMUSSNP425638	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
ss320175616	CHEV_1_187245316	CHEVERUD	SCREENING_POP	f	SNP												A					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31686867					SNP	A	A	C	A	C	A	C	C	C	C	A	A	A	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731574	NES10640067	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185153634 () rs orientation: forward

Symbol	Name	Function Class
Eprs1	glutamyl-prolyl-tRNA synthetase 1	Intron
Rr425383	regulatory region 425383	371 bp distal