rs31691441 SNP Detail

Summary

• ID
  rs31691441
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82505377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAGCTGAG CATGTTGATT CTGCTGGGCT GAACATGGTA
  GGCAGCTGTC TAGTGGACTC CTGCTTCAAG ATGGATGATC TGATCGTTGT GTGCAGTAAA
  W
  TCATCTGGTA TGCTACCCAT GCAAATCTTT GAGGGCTTGA GGACATTGCC TCAGAGAGGA
  ATGAGACCTC CTAGACCTTC ATGGAGCACT TTGTTGGGGG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss48078574	NES12094779	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs31691441					SNP	T	T	T	T	T	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48078574	NES12094779	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82505377 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d34	cytochrome P450, family 2, subfamily d, polypeptide 34	230 bp upstream
Gm49431	predicted gene, 49431	within coordinates
Rr308128	regulatory region 308128	1224 bp proximal
Rr310820	regulatory region 310820	within coordinates
Tssr135558	transcription start site region 135558	229 bp upstream