rs31691443 SNP Detail

Summary

• ID
  rs31691443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82505712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGGGTTT CTGAGCAGTG
  CAAAGCTGTC TCCTGAAGTT GAAGGGAAGA GTCTGGAGCT TTTATGAGCA AAACTAGGGC
  AGTGGTGGAA GGAAGCTGAA ATCCCTGTGG GCAAGTGAAG ATCAGTGAGG AAAGGCAGGT
  AGAGGCCCTA TGGGAAAGGG AGAGGTTGTG GTGGGAAGGC AGCTAGAGTC CTTGTTAAGT
  R
  AGGACCAGTT GGGGAAGGCA GCTGAAGCAT TGCCATCTTC AGTGCAGGTC TGTGGTCATC
  CAGTTGATAA GACACCACAA CATAGAACAC AGAATTTCTC AGACCCAGTC TGAGGAAGCT
  GAGAAGTGAT CTGAGAATCT TGCATGCCAC TAATTTGGTA CAGGGACATG TCACATGCTG
  GCCTCTGTTT CTTATTCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48078576	NES12094781	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31691443					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48078576	NES12094781	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82505712 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d34	cytochrome P450, family 2, subfamily d, polypeptide 34	565 bp upstream
Gm49431	predicted gene, 49431	within coordinates
Rr308128	regulatory region 308128	889 bp proximal
Rr310820	regulatory region 310820	295 bp distal
Tssr135558	transcription start site region 135558	564 bp upstream