rs31692758 SNP Detail

Summary

• ID
  rs31692758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19243028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAGAAAC TTTGAGATCT
  GAAGTCAAAC TTAACCAAAC CTTTCTTTCC GCCTGATGGT TTGTTTTGTG ATTGGTCTGA
  TGTAACCTCT TCTGGCTTAA ACCTCGTTTT GTGCTTGAGG ATGGTCAATA GAAGTTCGGA
  TCCTACCCCC TCCACCTCCC AACTACAGGA TTTAAAGCTT GCTTCACCAC ATCCGGAAAA
  R
  AATATTAAGG AGTATTTCAT GATACTTGGT AATTTAGCGT TCACTTTTTT GTTTGGTTTG
  GTTTTGAGAC AGAGTTGTCT TCCTTACTCT AGGCTGGGGT GGAATGCACT ATGTAGATTA
  GGTTGAGCTG CCTAAAACCT CCTGCCTCAG TCACCACGCC CGATTCCAGT CACCTTTTCC
  TAGTGTATGT AGTTGTTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45560506	mCV24717304	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31692758					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19243028 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13001	CpG island 13001	172 bp distal
Gm65217	predicted gene, 65217	611 bp downstream
Mtfr1	mitochondrial fission regulator 1	within coordinates
Rr397614	regulatory region 397614	577 bp downstream
Rr573951	regulatory region 573951	1507 bp distal
Rr573952	regulatory region 573952	744 bp distal
Rr573953	regulatory region 573953	within coordinates
Rr573954	regulatory region 573954	383 bp proximal
Rr573955	regulatory region 573955	900 bp proximal
Tssr28500	transcription start site region 28500	1548 bp downstream
Tssr28501	transcription start site region 28501	1513 bp downstream
Tssr28502	transcription start site region 28502	1502 bp downstream
Tssr28503	transcription start site region 28503	1491 bp downstream
Tssr28504	transcription start site region 28504	766 bp downstream
Tssr28505	transcription start site region 28505	756 bp downstream
Tssr28506	transcription start site region 28506	742 bp downstream
Tssr28507	transcription start site region 28507	639 bp downstream
Tssr28508	transcription start site region 28508	591 bp downstream
Tssr28509	transcription start site region 28509	571 bp downstream