rs31694771 SNP Detail

Summary

• ID
  rs31694771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95860473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGC ACTGGCCCCA GGATTCAAGG
  R
  AGGCAACAGC AGTGGGGGTG GGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45560351	mCV25062165	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135513206	ENSMUSSNP1243745	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss320841259	CHEV_3_95757084	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31694771					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95860473 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13530	CpG island 13530	1671 bp distal
Gm56819	predicted gene, 56819	1870 bp upstream
Gm65572	predicted gene, 65572	1475 bp downstream
Rr375411	regulatory region 375411	1273 bp downstream
Rr581095	regulatory region 581095	1881 bp distal
Rr581096	regulatory region 581096	1823 bp distal
Rr581097	regulatory region 581097	1177 bp distal
Rr581098	regulatory region 581098	within coordinates
Rr581099	regulatory region 581099	968 bp proximal
Tssr30664	transcription start site region 30664	1794 bp downstream