rs31695308 SNP Detail

Summary

• ID
  rs31695308
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:68456522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGTGAA AAGAATCCAA
  TCCTGGAATC AAGACCTTTG TGATATAGAT TTGCAGATGA TAAATGTTAA ATGCCTAAGA
  CTCCTTGTGG AGGAAGGGAA TAAATTTTCA CATATTTTAT ACAGCTTATG TCACAAAGAG
  AGGCCGAAAC AGAAAACCAT TCAAACATTA AACATTAAGG GAAGAATGAC ATCAGGTTTG
  S
  TACTCTGTGA TTATATTTTT CTTCTTTTTT TACCCTATTG GAAATCTTAA TTTTTCTTAT
  ACTATCCTTT GTTATTTTTA TGTATTCTTA TAATAAATAA AATAATAGCA TGAATGATAT
  TATGTGAACT AAAAATAGTA TATACATATA TGTGCATGAT GAAAAATAGG AGAAATGCAA
  AAAATACACT GTTCATGATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49765165	NES12378324	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31695308					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49765165	NES12378324	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:68456522 () rs orientation: forward

Symbol	Name	Function Class
2610007B07Rik	RIKEN cDNA 2610007B07 gene	1726 bp downstream
Aff2	AF4/FMR2 family, member 2	within coordinates
Rr6038	regulatory region 6038	279 bp proximal
Rr9940	regulatory region 9940	1880 bp proximal