rs31698241 SNP Detail

Summary

• ID
  rs31698241
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16060145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTAAATAA ACAAAATAAC CAATAAAAAT AAAAGAAATG
  AAAAAGAAAA CCTGACAATT TTAGAGGCAC CATGTAGAGT ATCGGTAATC CCTTTGGCAC
  R
  TATAGAAGGA ACTAAAGCTC ACTGAAAAAG GTCAAGAAGA GCAGGCTTTG TGTGGAAAAC
  TGTTATAGAT GAATCATTTC TACTCTATGT ATCAAAACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45560573	mCV22654071	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss134641267	ENSMUSSNP1513284	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31698241					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16060145 () rs orientation: forward

Symbol	Name	Function Class
Gm5150	predicted gene 5150	within coordinates
Rr374567	regulatory region 374567	879 bp downstream
Tssr32658	transcription start site region 32658	347 bp downstream
Tssr32659	transcription start site region 32659	363 bp downstream
Tssr32660	transcription start site region 32660	400 bp downstream