rs31698530 SNP Detail

Summary

• ID
  rs31698530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19595591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGGGAGG CAGGAAAATT
  TTGACGCAGT TCTTGACTAC CATGCCTGTG ATGTCTCTGC TGCATAGTGG GGTCACTGAG
  GGGTAGATGT TGGAGACTTC TCTTTCTCCA GCCCTCGGGA CAGCCAGGGA GTGGCCAGTG
  TCACCACAGT GAATGGCACA ACTCTGTGGG GTGGGTGGGC ATCTTTAACA CTTACATTTG
  Y
  TTGGGGGGGG GTCTTGACTT CAAAGTCCTC TTCAGCTAGG CAATGATGAG GAGACCAGCC
  TGGGCTACAT GAGACCCTGC CTCAAAAAAA TCAAAGGGAA ATAAAAGACT CTGGTTTTTG
  TTTGCTTGTT TGTTTTGTTT TGTCTTGTTT TGTTTTTGAA ATAGAGTTCC ATGTAGCCCA
  GGCTAGACTT GAACTTCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46059081	mCV22884378	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31698530					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19595591 () rs orientation: forward

Symbol	Name	Function Class
Ceacam16	CEA cell adhesion molecule 16	367 bp upstream
Gm44659	predicted gene 44659	within coordinates
Tssr71042	transcription start site region 71042	441 bp upstream
Tssr71043	transcription start site region 71043	424 bp upstream
Tssr71044	transcription start site region 71044	367 bp upstream