rs31698815 SNP Detail

Summary

• ID
  rs31698815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89099171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTT GCCTGGATGT ATGATTTTCT
  Y
  TGTTCTGTGA AACCATGAAC CTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45560471	mCV24883999	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss320836724	CHEV_3_88995786	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31698815					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89099171 () rs orientation: forward

Symbol	Name	Function Class
Rr367465	regulatory region 367465	1177 bp downstream
Rr579971	regulatory region 579971	939 bp distal
Rr579972	regulatory region 579972	1659 bp proximal