rs31703745 SNP Detail

Summary

• ID
  rs31703745
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:18999529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAATTGC CTCCCCTGAG
  GCCACATTTA TTGGCCACCT GGTCCATCTG GTTCCCCAGG GCCCAAACAG CCATTTGGCA
  CAAATTCCTG GCTGCACTGT CACACCCTGT GGCTGGGGAT GGAGACACAG AGGTGGCCCA
  GACAGACTGC CCTGCCACCA GGGAGCAGCT GGTCCAGCCT TGGGGGGGGG GGGCAGTGCC
  R
  AGGAGGCCAC TGGCTGATGT AGGAAAACAA CAGCTCAAAT ATAGAGTCAG ATACCACAGA
  CCTTGGTTCA AATTCTCCAC CAAACCCTTC TTCCACATGA CCAGAGAGCT CCTCATGTCT
  CTCATCTGTC ACTTAGGGAA GACATGATGG TCCCTACCTC CTGAAGGCTG TGATCTGGTT
  AAAGTACTAG GCACGGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46059360	mCV25048935	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148471823	ENSMUSSNP3045127	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31703745					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18999529 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Tssr64812	transcription start site region 64812			692 bp upstream
Tssr70883	transcription start site region 70883			1121 bp upstream
Tssr70884	transcription start site region 70884			776 bp upstream
Tssr70885	transcription start site region 70885			385 bp downstream
Tssr70886	transcription start site region 70886			938 bp downstream
Vasp	vasodilator-stimulated phosphoprotein			Intron
				Noncoding-Transcript-Variant