rs31706101 SNP Detail

Summary

• ID
  rs31706101
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:63402930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGCCTGTGCA TTCAGCTAAG CAAACTGCTC CCCACCACAC CCCCTTGCTA AGAGGATGGA
  AAGTATAGTC ACAGCTGGCC CATGAAGGGG TAGACAGCCT GACCCAGAAC ACCCAAATTA
  TACCCACAGG AATTATTTCT GACAAGTTAT TATCCTCTAT AACAATCTTT TCCAAAACAC
  CTTGATTTCA AGATCCACAG GGAAGCTTAT TTACAACGTA GCCCTCCATC CTGATTCAGG
  ACCCTTGCGT TGGCCCTCTG TATGAAGTAC AGATCCCTAG GGGACACAAT TCTAGTGAGT
  S
  TGGGATGCAG TGTCCCTAAG GATCACCTCT GCTGTCCCCC AGCCACCGGT AGGAAGCCAC
  ACCAAAGCCT CAATGTGTGT TTGCTGACCT ACAAGACAGG CTGAGCTCAG CCCTGGAAAC
  GAAAGCCACA TCAAAGCAGA ATGAGATGTC CCAGTCCCCT CCCCCGTCAG ACCTTACCTA
  CACTGCTCCA TGGCTGGCCA CACACAAGGA AAACCCCTAA ACTGGCTGGT GATCCACAAA
  ACTGCCTTTC ATCTGTTTAG GTGGGAAGAA AGGGGGTGGG GTGGGGGGGG AGAAGCAGTT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46060546	mCV25346980	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31706101					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63402930 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19187	CpG island 19187	1568 bp proximal
Otud7a	OTU domain containing 7A	within coordinates