rs31706948 SNP Detail

Summary

• ID
  rs31706948
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAATGGAACC TTCCTAAGGC CTATCTAATT ACCCGAAATA
  TGAGTTAATC CATCAGGCCA GTCAATCAGC TGGCTAAGGG ATTCTCTTTT CCCCCTTTTC
  Y
  GCCCCTGGCT GCAGATTCAC CTAACACCAT GCTGGAGAAA ATGGAGGAAT ACTTATTCTT
  TTAATGAGAT ACTATATTTT CCTTCCCAGA ATCCTTTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39317479	mCV23046294	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss148246453	ENSMUSSNP6149308	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31706948					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010623 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	856 bp upstream
Rr304809	regulatory region 304809	578 bp proximal
Rr310901	regulatory region 310901	1943 bp distal
Rr310902	regulatory region 310902	within coordinates
Tssr132442	transcription start site region 132442	878 bp upstream
Tssr132443	transcription start site region 132443	901 bp upstream
Tssr132444	transcription start site region 132444	935 bp upstream