rs31707947 SNP Detail

Summary

• ID
  rs31707947
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:75424419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATCTCTAA ATTGGGCCTC TCCCCCCAGA AGAAAAGGGG
  TCAAAAGCGG GCCACCGACA CACCCATTCC AAGAACAACC ACGGGATGTT CCAGCCCTAA
  R
  TCATCGCGGA TGTCCTGACC ACACCCTGAT ACCACCAAGT TCCTGCTTCC CCAAGTAGCT
  GCCAAAAGAA AGAATTTCTA TTGCCCCCCC TCCCATAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46060273	mCV25436533	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31707947					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75424419 () rs orientation: forward

Symbol	Name	Function Class
AU020206	expressed sequence AU020206	within coordinates
Rr380973	regulatory region 380973	within coordinates
Tssr73052	transcription start site region 73052	1742 bp upstream
Tssr73053	transcription start site region 73053	598 bp upstream
Tssr73054	transcription start site region 73054	549 bp upstream
Tssr73055	transcription start site region 73055	514 bp upstream
Tssr73056	transcription start site region 73056	1935 bp downstream