rs31712865 SNP Detail

Summary

• ID
  rs31712865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129406550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAC CCGAGTGGAG GCGCATGCTC
  R
  GTGCGCGCAC GGTGTGCGAG GGAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45562922	mCV22329421	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss135887092	ENSMUSSNP5573062	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320962612	CHEV_3_129315819	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31712865					SNP	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129406550 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	within coordinates
Rr585045	regulatory region 585045	within coordinates
Rr585046	regulatory region 585046	1356 bp proximal
Tssr31647	transcription start site region 31647	33 bp downstream
Tssr35617	transcription start site region 35617	993 bp downstream