GTGGC TCGGCCCCGG GAAATCGGTT R GTTTCTTGTC TGGTTTCTCA ACATG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss46061292 | mCV25295216 | ABI | CRAMUS_MOUSE | f | SNP | G | A | A | G |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
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rs31714140 | SNP | G | A | A | G |
Location: Chr7:45353673 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Car11 | carbonic anhydrase 11 | within coordinates | ||||||
Cpgi19081 | CpG island 19081 | 277 bp proximal | ||||||
Dbp | D site albumin promoter binding protein | 985 bp upstream | ||||||
Rr400318 | regulatory region 400318 | 465 bp upstream | ||||||
Tssr66612 | transcription start site region 66612 | 936 bp upstream | ||||||
Tssr66613 | transcription start site region 66613 | 1044 bp upstream | ||||||
Tssr66614 | transcription start site region 66614 | 1081 bp upstream | ||||||
Tssr66615 | transcription start site region 66615 | 1111 bp upstream | ||||||
Tssr66616 | transcription start site region 66616 | 1161 bp upstream | ||||||
Tssr66617 | transcription start site region 66617 | 1195 bp upstream | ||||||
Tssr66618 | transcription start site region 66618 | 1269 bp upstream | ||||||
Tssr66619 | transcription start site region 66619 | 1942 bp upstream | ||||||
Tssr66620 | transcription start site region 66620 | 1981 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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