rs31718193 SNP Detail

Summary

• ID
  rs31718193
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86181608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCTGTAGG ACCGGCCCCT TCATGTACTC TAGCAGTTCA
  TTAATGGGAT AGATGTTGGG TTGGGCCATT CCAGAGCCCT GGATCTGGGC CTGAGAGGAA
  W
  GTGAGTTTGT CAGTTTATGG GCTAAATCAT TTTCATGCTC TTGGAGCCAG ATCACAGGCA
  ACCCCTGCTA CCAGAACCAG CTCTATCCTG CTGCCCAGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45563338	mCV24142032	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss135445829	ENSMUSSNP324391	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320829511	CHEV_3_86078223	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31718193					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86181608 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	931 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates