rs31719241 SNP Detail

Summary

• ID
  rs31719241
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127793889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTCAGCT ATGGTTCCAG
  AGCCATGACT GACTGCCTAC TGCTGCCATG CTCCCCGACA TAATAGTTAT TGATTGTAAC
  CCTTCAGGAC CACGGGCTCC AAATTAAATG CTTTCTTTTA TCAGTTTCCT TGGTTACAGT
  GTCTTGTCAC AGCAATAGAA AGTTCACCAA GGCACCACTG AGTTGTTCCC CTCCTCTGTC
  Y
  ATCACTGACT GATCCAGTCT TTTCACTTTG ATATCCTACC ACGTCTCCCT TTTATGTGAT
  CTTGGCAGAG CCTTAAGGCA TATTGCTATG TCAGGACACC TAACCTACCA GCCTCATTAG
  TTTTCATTTC TTCTAGAAAA GCTATTCTAC TTTGTTTTTC TTTTGAGACA GGATCTTGCT
  GTGAGCTTTG GTTGCTGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45563528	mCV25234249	ABI	CRAMUS_MOUSE	f	SNP	T	T
ss320959097	CHEV_3_127703158	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs31719241					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127793889 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	1734 bp proximal
Rr584917	regulatory region 584917	1821 bp proximal