rs31719258 SNP Detail

Summary

• ID
  rs31719258
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136936257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atatttacc ttattttatt ttatattcat
  ttaaacattt ttttcatttg tttatttatt gtgcacatgg cacatgtgtg gaggtcagag
  gaaaattcac tatggggtca tttctctccc tTTTCTCCTT GATGCCAACA ACCTTTGAGA
  Y
  ATCTTGTGGC CTTTTTTGTC TTTGTTTGtt tatttgtttg agacagggtt tctctgtgta
  gccctggaag ttctgaaact cactctatag accaggctgg catcaaactc aaagaaagat
  ctgcctgcct ctgccttctg agtgctggaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45063591	mCV23233961	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss145563662	ENSMUSSNP4101152	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss319997348	CHEV_1_138905096	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31719258					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136936257 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	1749 bp proximal
Rr419563	regulatory region 419563	1855 bp proximal