rs31720332 SNP Detail

Summary

• ID
  rs31720332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30450482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACACCACA CTGCCTGGGG
  CATGGTCAGG AAGGGCTTTC TGACATGCTG GCCATTTGAG CCAGGTGTGG AGTTAGTGGA
  GACAGCTGGG TCACACTCTG GCTTCCAGGC ACATGAAAAG TTGCCAGACA GCCATGGGGG
  GCAGGGTGGA GGGCTGAGGA GCTCGGACAA AGGCCATGTA ACTGGAGCAG AGAGAGAGGT
  R
  GGAGAGGGAA CTCCAAGGAC AAAACCAGGC AACTCCTTCA GCTCCTTGGG GTGGGGGTGG
  GGGGGTCCTC TTCTCCCTGT CTGCTTTCCA CTCTTCCAGA GTTATCCTGT AGAGCAAGCC
  TTCTAAGAGG ACTGACAGGG TGGTTAGGGA TGGAGGGTGC CTGAAGGTGG GTTCAAAAGG
  AAGGAGGATG GCCAGTGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46062233	mCV25317040	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss322136408	CHEV_7_31536076	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31720332					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30450482 () rs orientation: forward

Symbol	Name	Function Class
Rr644909	regulatory region 644909	878 bp distal
Sbsn	suprabasin	414 bp upstream
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	469 bp upstream
Tssr71856	transcription start site region 71856	1100 bp downstream