rs31721851 SNP Detail

Summary

• ID
  rs31721851
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73604828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCTCTGGT CCGTTTGTTC
  CTCAGAAGTC CTCTCGGACC TCCATATCAG CTCATTAGAC TGGCTGTTTA GGCCTAGGAA
  CCTGGGCTTC TGCCTTACAG GCCAAGCGTA TCCAACTGCC CCAGGCATTT GTCCATTGGC
  TGGTCTAAGT GTGATTGACA GGGCCTGGGG ACTGTTCCCA CGGACACTGC CAGCTGGGCC
  Y
  GCCCTGCCCC AGGAGGGACC TCGAACCCTG TGGGACCTGT GGCCTGGGTT CTTGGCAGCC
  TTGTGTCTGT CCTGGCTTTT CGTCTGCCTT GGGGAGTTGG GTGGGCCCTG GGGGTCACAC
  AGCCCTGTCT CAGCCAGCTA TGGGTAGGTC AAGGTATAGC CTCCTCATTC TCAGTGTCTC
  CCCTCCCCCC TGTTTCTGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39318514	mCV23352497	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31721851					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73604828 () rs orientation: forward

Symbol	Name	Function Class
Ptp4a3	protein tyrosine phosphatase 4a3	within coordinates
Rr311850	regulatory region 311850	27 bp distal
Rr369950	regulatory region 369950	257 bp downstream