rs31722198 SNP Detail

Summary

• ID
  rs31722198
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85942286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGAGGTCG TCAAAGCCCC GCAGTGCAAG CGGGTCATGT
  GGTCACAGGT CTAATGTGCT GTCTCCACTT GCTGATGCTG AGTTTGCTAC AGTCACCCTC
  S
  TACCCTACAG TGGACCTCCT AGGTCAGACC CCATACGGTG CTGCAGGTCA GTCCTCCAAC
  CAGGCTAGGG CCTGGGGTTC TGGAGGGTGT GGTCTTTTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39317916	mCV25422007	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31722198					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85942286 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7499	CpG island 7499	within coordinates
Gm41375	predicted gene, 41375	within coordinates
Gramd4	GRAM domain containing 4	within coordinates
Rr507410	regulatory region 507410	1404 bp distal
Rr507411	regulatory region 507411	380 bp distal
Rr507412	regulatory region 507412	152 bp proximal
Rr507413	regulatory region 507413	168 bp proximal
Rr507414	regulatory region 507414	653 bp proximal
Tssr132563	transcription start site region 132563	661 bp upstream
Tssr132564	transcription start site region 132564	711 bp upstream
Tssr135780	transcription start site region 135780	490 bp downstream