rs31722669 SNP Detail

Summary

• ID
  rs31722669
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:35501091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC GGAAAGCTGT TCATGCAATG
  Y
  AATTGTGTGA GGCAAATTTA CATAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46062261	mCV23678934	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148817663	ENSMUSSNP4484274	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31722669					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35501091 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18877	CpG island 18877	707 bp proximal
E130304I02Rik	RIKEN cDNA E130304I02 gene	926 bp upstream
Gm73276	predicted gene, 73276	1662 bp downstream
Rr645475	regulatory region 645475	520 bp proximal
Rr645476	regulatory region 645476	937 bp proximal
Rr645477	regulatory region 645477	1313 bp proximal
Tssr72060	transcription start site region 72060	1302 bp downstream
Zfp507	zinc finger protein 507	Intron