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rs31722669 SNP Detail
Summary
  • ID
    rs31722669
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr7:35501091 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          ATTTC GGAAAGCTGT TCATGCAATG
    Y
    AATTGTGTGA GGCAAATTTA CATAA                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
C57BL/6J
DBA/2J
ss46062261 mCV23678934 ABI CRAMUS_MOUSE f SNP C T T
ss148817663 ENSMUSSNP4484274 ENSEMBL ENSEMBL_Sanger f SNP C T
SNP Consensus Information
SNP Consensus Type
A/J
C57BL/6J
DBA/2J
rs31722669 SNP C T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:35501091 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi18877 CpG island 18877 707 bp proximal
E130304I02Rik RIKEN cDNA E130304I02 gene 926 bp upstream
Gm73276 predicted gene, 73276 1662 bp downstream
Rr645475 regulatory region 645475 520 bp proximal
Rr645476 regulatory region 645476 937 bp proximal
Rr645477 regulatory region 645477 1313 bp proximal
Tssr72060 transcription start site region 72060 1302 bp downstream
Zfp507 zinc finger protein 507 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory