rs31722819 SNP Detail

Summary

• ID
  rs31722819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25953233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTCCTGC TTCTGCTTCT
  GCTTCTGCTT CTGCTTCTGC TTCTGCTTCT GCTTCTGCTT CTGCTTCTGC TTCTGCTTCT
  GCTTCTGCTT CTGCTTCTGC TTCTGCTTGA GATCTTACTT GATATAAAAA AGGTTTGCAG
  AACATTCTCT TTGGAATGGA GTATATTGTC CTGGGAGTGT GTCCTTCCAC TTCACTGGTG
  R
  GCTTTCTAAC TTGGTGCCTT ATTTCTTACC ATTTGCATTC TCATCTTATG AGTGGGACAA
  GATTATCACA TAGTTTCAAT AAAGACACTG AACATTTATT TCCCTAGTAG TTATCACTCA
  TCAGATATTT TCATTCTCGA AGTTTCTATT GACATATTTT GCCTCATTTT GCTTTGTTGT
  GCATGCCATA AGATTATTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46061382	mCV24589102	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148607742	ENSMUSSNP4615534	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31722819					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25953233 () rs orientation: forward

Symbol	Name	Function Class
Rr380532	regulatory region 380532	1587 bp downstream
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	1272 bp upstream