rs31726703 SNP Detail

Summary

• ID
  rs31726703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164507684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACACATCT CTATGTCTCC
  ATGTCTGTAT CTATGTCTTA AAGCTGCTTA TCACGCATTT TAAATGATTT AGATGTGAGC
  ACTACTTTTC TTAAAGTCAT TCTCATCTAA GTGATTTTAC TCACTCAGTA TTCCAAGTCA
  CATTATTTTT CATCCATTCA CTTTTAGTCT CTCTAGGTTT TTATATTTAA AACATGCATT
  Y
  TATAAAGAGT GTAGTGTATG CTTCTTCCAT CCCTTGTGAT ACATTTTATT TTTTAATTCA
  CGTATTAATC TATGCACATT TAGTGTAACG GGTACAATTT CTCATCTTAA TACATGCATT
  TTTCTATTTT AAATGCTTAT TTGCTTATTT TTATTATTCC TTGTTTTTTT GTTAATAAAC
  ATCTTTATTA TTTGTAACTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45064021	mCV22791148	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss145984884	ENSMUSSNP6881855	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31726703					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164507684 () rs orientation: forward

Symbol	Name	Function Class
Gm37184	predicted gene, 37184	1819 bp upstream
Gm37853	predicted gene, 37853	within coordinates
Rr422251	regulatory region 422251	1151 bp distal
Rr422252	regulatory region 422252	1526 bp proximal