rs31727264 SNP Detail

Summary

• ID
  rs31727264
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180109300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCCCTGGA TGTGTCTCTA AACACTTTGC TCATACTATC
  GGAAGCATCT TTCAAACTTG TAAATATGTC ACTGTTCGTT CGTTCGTTCG TTCTCTCTCT
  S
  TCTCTCTCTC TGTCTCTCTG TCTCTCTCTG TGTGTCTGTC TCTGTATGTC TCTTTGTGTG
  TCTGTCTCTG TCTACATGTC TCTCTCTGTG TCTGTCTCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45064123	mCV23631353	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31727264					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180109300 () rs orientation: forward

Symbol	Name	Function Class
Gm70819	predicted gene, 70819	within coordinates
Rr367068	regulatory region 367068	1693 bp downstream
Rr424445	regulatory region 424445	1310 bp distal
Rr424446	regulatory region 424446	820 bp proximal